Most of the stuff that happens in the Matrix sequels is pretty esoteric. None of it is really supposed to be taken at face value, and you practically have to be a ****ing theology scholar (or read a bunch of papers that explain what's going on) to really "get it". Because of that, they largely fail as movies simply because it's so difficult to really appreciate them. I've always said that you shouldn't have to read any books or anything to appreciate a movie and that it should stand on it's own. The Matrix sequels are the best example of that. They are movies that have required reading, and if you do it, they're pretty awesome, but take at face value, they're fairly awful and incomprehensible.
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