You shouldn't need something else to run the patches. Usually installation instructions are included in the README text file which is usually included in the zip. It's been so long, but levels go in episode and other mods go in resource maybe. There's a general instruction page here but it mentions patch commander. I don't know if that is still around/maintained. After the patch commander section is a section on using the command line.
https://www.massassi.net/levels/howto.shtml
https://www.massassi.net/levels/howto.shtml